Data

Ensembl 84, NCBI 07-2016


Alignment

MAFFT7: mafft --globalpair --jtt 200 --seed PF04831_seed --maxiterate 1000 --retree 1


Phylogenetic analysis

MEGA 6.06: ML-T92+G, codon positions 1+2, bootstrap (100) support for ML tree


Model test (training dataset)

MEGA 6.06: NJ tree, Method ML, codon positions 1+2

Table. Maximum Likelihood fits of 24 different nucleotide substitution models
Model	Parameters	BIC	AICc	lnL	(+I)	(+G)	R	f(A)	f(T)	f(C)	f(G)	r(AT)	r(AC)	r(AG)	r(TA)	r(TC)	r(TG)	r(CA)	r(CT)	r(CG)	r(GA)	r(GT)	r(GC)
T92+G	48	8711.254	8346.626	-4125.154	n/a	0.40	 1.27	0.295	0.295	0.205	0.205	0.064	0.044	0.116	0.064	0.116	0.044	0.064	0.168	0.044	0.168	0.064	0.044
K2+G	47	8715.050	8358.011	-4131.853	n/a	0.39	 1.29	0.250	0.250	0.250	0.250	0.055	0.055	0.141	0.055	0.141	0.055	0.055	0.141	0.055	0.141	0.055	0.055
T92+G+I	49	8720.857	8348.640	-4125.154	0.00	0.40	 1.27	0.295	0.295	0.205	0.205	0.064	0.044	0.116	0.064	0.116	0.044	0.064	0.168	0.044	0.168	0.064	0.044
HKY+G	50	8721.067	8341.260	-4120.457	n/a	0.40	 1.28	0.311	0.279	0.209	0.201	0.060	0.045	0.115	0.067	0.119	0.043	0.067	0.159	0.043	0.177	0.060	0.045
K2+G+I	48	8724.653	8360.024	-4131.853	0.00	0.39	 1.29	0.250	0.250	0.250	0.250	0.055	0.055	0.141	0.055	0.141	0.055	0.055	0.141	0.055	0.141	0.055	0.055
TN93+G	51	8730.508	8343.111	-4120.376	n/a	0.40	 1.28	0.311	0.279	0.209	0.201	0.060	0.045	0.111	0.067	0.122	0.043	0.067	0.164	0.043	0.172	0.060	0.045
HKY+G+I	51	8730.670	8343.274	-4120.457	0.00	0.40	 1.28	0.311	0.279	0.209	0.201	0.060	0.045	0.115	0.067	0.119	0.043	0.067	0.159	0.043	0.177	0.060	0.045
GTR+G	54	8735.841	8325.678	-4108.638	n/a	0.43	 1.15	0.311	0.279	0.209	0.201	0.042	0.063	0.096	0.047	0.124	0.036	0.094	0.167	0.065	0.149	0.050	0.067
TN93+G+I	52	8740.111	8345.125	-4120.376	0.00	0.40	 1.28	0.311	0.279	0.209	0.201	0.060	0.045	0.111	0.067	0.122	0.043	0.067	0.164	0.043	0.172	0.060	0.045
GTR+G+I	55	8745.444	8327.693	-4108.638	0.00	0.43	 1.15	0.311	0.279	0.209	0.201	0.042	0.063	0.096	0.047	0.124	0.036	0.094	0.167	0.065	0.149	0.050	0.067
JC+G	46	8811.107	8461.660	-4184.683	n/a	0.42	 0.50	0.250	0.250	0.250	0.250	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083
JC+G+I	47	8820.710	8463.672	-4184.683	0.00	0.42	 0.50	0.250	0.250	0.250	0.250	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083
T92+I	48	8825.063	8460.435	-4182.058	0.38	n/a	 1.25	0.295	0.295	0.205	0.205	0.064	0.045	0.116	0.064	0.116	0.045	0.064	0.166	0.045	0.166	0.064	0.045
K2+I	47	8832.371	8475.333	-4190.514	0.38	n/a	 1.26	0.250	0.250	0.250	0.250	0.055	0.055	0.139	0.055	0.139	0.055	0.055	0.139	0.055	0.139	0.055	0.055
HKY+I	50	8834.958	8455.150	-4177.402	0.38	n/a	 1.26	0.311	0.279	0.209	0.201	0.061	0.045	0.114	0.067	0.118	0.044	0.067	0.158	0.044	0.176	0.061	0.045
GTR+I	54	8842.383	8432.221	-4161.909	0.36	n/a	 1.29	0.311	0.279	0.209	0.201	0.044	0.060	0.120	0.049	0.110	0.023	0.090	0.148	0.068	0.186	0.033	0.070
TN93+I	51	8844.060	8456.664	-4177.152	0.38	n/a	 1.26	0.311	0.279	0.209	0.201	0.061	0.045	0.119	0.067	0.113	0.044	0.067	0.151	0.044	0.184	0.061	0.045
JC+I	46	8927.736	8578.288	-4242.998	0.38	n/a	 0.50	0.250	0.250	0.250	0.250	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083
GTR	53	9012.485	8609.910	-4251.761	n/a	n/a	 1.09	0.311	0.279	0.209	0.201	0.044	0.074	0.106	0.049	0.108	0.020	0.110	0.145	0.074	0.164	0.028	0.076
T92	47	9024.417	8667.379	-4286.537	n/a	n/a	 1.11	0.295	0.295	0.205	0.205	0.069	0.048	0.109	0.069	0.109	0.048	0.069	0.158	0.048	0.158	0.069	0.048
HKY	49	9039.550	8667.332	-4284.500	n/a	n/a	 1.11	0.311	0.279	0.209	0.201	0.065	0.049	0.107	0.073	0.111	0.047	0.073	0.149	0.047	0.166	0.065	0.049
K2	46	9042.365	8692.918	-4300.312	n/a	n/a	 1.09	0.250	0.250	0.250	0.250	0.060	0.060	0.131	0.060	0.131	0.060	0.060	0.131	0.060	0.131	0.060	0.060
TN93	50	9049.121	8669.314	-4284.484	n/a	n/a	 1.11	0.311	0.279	0.209	0.201	0.065	0.049	0.108	0.073	0.110	0.047	0.073	0.147	0.047	0.167	0.065	0.049
JC	45	9122.494	8780.637	-4345.178	n/a	n/a	 0.50	0.250	0.250	0.250	0.250	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083	0.083
NOTE.-- Models with the lowest BIC scores (Bayesian Information Criterion) are considered to describe the substitution pattern the best. For each model, AICc value (Akaike Information Criterion, corrected), Maximum Likelihood value (lnL), and the number of parameters (including branch lengths) are also presented [1]. Non-uniformity of evolutionary rates among sites may be modeled by using a discrete Gamma distribution (+G) with 5 rate categories and by assuming that a certain fraction of sites are evolutionarily invariable (+I). Whenever applicable, estimates of gamma shape parameter and/or the estimated fraction of invariant sites are shown. Assumed or estimated values of transition/transversion bias (R) are shown for each model, as well. They are followed by nucleotide frequencies (f) and rates of base substitutions (r) for each nucleotide pair. Relative values of instantaneous r should be considered when evaluating them. For simplicity, sum of r values is made equal to 1 for each model. For estimating ML values, a tree topology was automatically computed. The analysis involved 24 nucleotide sequences. Codon positions included were 1st+2nd. There were a total of 646 positions in the final dataset. Evolutionary analyses were conducted in MEGA6 [2].

Abbreviations: GTR: General Time Reversible; HKY: Hasegawa-Kishino-Yano; TN93: Tamura-Nei; T92: Tamura 3-parameter; K2: Kimura 2-parameter; JC: Jukes-Cantor.

1. Nei M. and Kumar S. (2000). Molecular Evolution and Phylogenetics. Oxford University Press, New York.
2. Tamura K., Stecher G., Peterson D., Filipski A., and Kumar S. (2013). MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution30: 2725-2729.
Disclaimer: Although utmost care has been taken to ensure the correctness of the caption, the caption text is provided "as is" without any warranty of any kind. Authors advise the user to carefully check the caption prior to its use for any purpose and report any errors or problems to the authors immediately (www.megasoftware.net). In no event shall the authors and their employers be liable for any damages, including but not limited to special, consequential, or other damages. Authors specifically disclaim all other warranties expressed or implied, including but not limited to the determination of suitability of this caption text for a specific purpose, use, or application.

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Training dataset

>POPD1_GORGO_ENSGGOT00000024891
ATGAATAAGACCACTTGTGAAAACTGGAGAGAGATACATCATCTGGTTTTTCATGTAGCAAATATTTGTTTT
GCAGTTGGGTTGGTTATTCCAACTACTCTTCACCTTCATATGATATTTCTTAGGGGAATGTTAACTCTAGGA
TGTACCCTTTATATCGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATAATGATCTGGAACTCTGTGTTC
TTGGGTGTCAACATTTTGCATCTGTCGTATCTTTTATACAAGAAGAGACCGGTAAAGATTGAAAAGGAACTC
AGTGGCATCTACCGGCGATTGTTTGAACCACTCCGTGTGCCTCCAGATTTGTTCAGAAGACTAACTGGACAG
TTTTGCATGATCCAAACCTTGAAAAAGGGCCAAACTTATGCTGCAGAGGATAAAACCTCAGTTGATGACCGT
CTGAGTATTCTCTTGAAGGGAAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACATACTTTCTGGAATCAGAACCTTTC
TTGTATGAAATTTTTAGGTATCTTATTGGAAAAGACATCACAAATAAGCTCTACTCGTTGAATGATCCCACC
TTAAATGATAAAAAAGCCAAAAAGCTGGAACATCAGCTCAGCCTCTGCACACAGATCTCCATGTTGGAAATG
AGGAACAGTATAGCCAGCTCCAGTGACAGTGACGACGGCTTGCACCAGTTTCTTCGGGGTACCTCCAGCATG
TCCTCTCTTCATTCATCCCCACACCAGCGAGCCTCTGCCAAGATGAAACCGATAGAAGAAGGAGCAGAAGAT
GATGTCTTTGAACCGGCATCTCCACAGCTGCCT
>POPD1_PONAB_ENSPPYT00000019641
ATGAATGAGACCACTTGTGAAAACTGGAGAGAGATACATCATCTGGTTTTTCATGTAGCAAATATTTGTTTT
GCAGTTGGGTTGGTTATTCCAACTACTCTTCACCTTCATATGATATTTCTTAGGGGAATGTTAACTCTAGGA
TGTACCCTTTATATCGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATAATGATCTGGAACTCTGTGTTC
TTGGGTGTCAACATTTTGCATCTGTCGTATCTTTTATACAAGAAGAGACCGGTAAAGATTGAAAAGGAACTC
AGTGGCATCTACCGGCGATTGTTTGAACCACTCCGTGTGCCTCCAGATTTGTTCAGAAGACTAACTGGACAG
TTTTGCATGATCCAAACCTTGAAAAAGGGCCAAACTTATGCTGCAGAGGATAAAACCTCAGTTGATGACCGT
CTGAGTATTCTCTTGAAGGGAAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAATATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACATACTTTCTGGAATCAGAACCTTTC
TTGTATGAAATCTTTAGGTATCTTATTGGAAAAGACATTACAAATAAACTCTACTCATTGAATGATCCCACC
TTAAATGAAAAAAAAGCCAAAAAGCTGGAACATCAGCTCAGCCTCTGCACACAGATCTCCATGTTGGAAATG
AGGAACAGTATAGCCAGCTCCAGTGACAGTGACGACGGCTTGCATCAGTTTCTTCGGGGTACTTCCAGCATG
TCCTCTCTTCATTCATCCCCACACCAGCGAGCCTCTGCCAAGATGAAACCGATAGAAGAAGGAACAGAAGAT
GACGTCTTTGAACCGGCATCTCCACAGCTGCCT
>POPD1_NOMLE_ENSNLET00000018055
ATGAATGAGACCACTTGTGAAAACTGGAGAGAGATACATCATCTGGTTTTTCATGTAGCAAATATTTGTTTT
GCAGTTGGGTTGGTTATTCCAACTACTCTTCACCTTCATATGATATTTCTTAGGGGAATGTTAACTCTAGGA
TGTACCCTTTATATCGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATAATGATCTGGAACTCTGTGTTC
TTGGGTGTCAATATTTTGCATCTGTCGTATCTTTTATACAAGAAGAGACCGGTAAAGATTGAAAAGGAACTC
AGTGGCATCTACCGGCGATTGTTTGAACCACTCCATGTGCCTCCAGATTTGTTCAGAAGACTAACTGGACAG
TTTTGCATGATCCAAACCTTGAAAAAGGGCCAGACTTATGCTGCAGAGGATAAAACCTCAGTTGATGACCGT
CTGAGTATTCTCTTGAAGGGAAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACATACTTTCTGGAATCAGAACCTTTC
TTGTATGAAATCTTTAGGTATCTTATTGGAAAAGACATTACAAATAAGCTCTACTCATTGAATGATCCCACC
TTAAATGATAAAAAAGCCAAAAAGCTGGAACATCAGCTCAGCCTCTGCACACAGATCTCCATGTTGGAAATG
AGGAACAGTATAGCCAGCTCCAGTGACAGTGACGACGGCTTGCACCAGTTTCTTCGGGGTACCTCCAGCATG
TCCTCTCTTTATTCATCCCCACACCAGCGAGCCTCTGCCAAGATGAAACCAATAGAAGAAGGAGCAGAAGAT
GACGTCTTTGAACCGGCATCTCCACAGCTGCCT
>POPD1_CALJA_ENSCJAT00000003197
ATGAATGAGACCACTTGTGAAAACTGGAGAGAGATACATCATCTGGTTTTTCATGTAGCAAATATTTGTTTT
GCAGTTGGGTTGATTATTCCAACTACTCTTCACCTTCATATGATATTTCTTAGGGGAATGTTAACTCTAGGA
TGTACGCTTTATATCGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATAATGATCTGGAACTCTGTGTTC
TTGGGTGTCAACATTTTGCATCTGTCATATCTTTTATACAAGAAGAGACCGGTAAAGATTGAAAAGGAACTC
AGTGGCATCTACCGGCGATTGTTTGAACCACTCCGTGTGCCTCCAGATTTGTTCAGAAGATTAACTGGACAA
TTTTGCATGATCCAAACCTTGAAAAAGGGCCAGACGTACGCTGCAGAAGATAAAACCTCAGTTGATGACCGT
CTGAGTATTCTCCTGAAGGGGAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACATACTTTCTGGAATCAGAACCTTTC
TTGTATGAAATCTTTAGGTATCTTATTGGAAAAGACATTACAAATAAGCTCTACTCATTGAATGATCCCACC
TTAAATGATAAAAAAGCCAAAAAGCTGGAACATCAGCTCAGCCTCTGCACACAGATCTCCATGCTGGAAATG
AGGAACAGTATAGCCAGCTCCAGTGACAGTGACGAGGGCTTGCACCAGTTTCTTCGGGGCACCTCCAGCATG
TCCTCTCTTCATTCATCCCCACACCAGCGAGCCTCTGCCAAGATGAAACCAATAGAAGAAGGGGTAGAAGAT
GATGTCTTTGAACTGGTATCTCCACAGCTGCCT
>POPD1_OTOGA_ENSOGAT00000011049
ATGAATGAGACCACTTGTGAAAACTGGAGAGAGATACATCATCTCGTTTTTCATGTAGCAAATGTTTGTTTT
GCAATAGGGTTGGTTATTCCGACCAGTCTTCACCTTCACATGATCTTTCTTAGGGGGATGTTCACGATAGGA
TGCACCCTCTACATTGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATAATGATCTGGAACTCTGTGTTC
TTGGGTGTCAACATGTTGCATCTTTCATATCTTTTATACAAGAAAAGACCGGTGAAGATTGAAAAGGAACTC
AGTGGCATCTACCGGCGATTGTTTGAACCACTCCGAGTGCCTCCAGATTTGTTCAGAAGATTAACTGGACAG
TTTTGCATGATCCAAACCTTGAAAAAGGGCCAGGCTTATGCTGCAGAGGATAAAACCTCAGTCGATGACCGT
CTGAGTATTCTCCTGAAGGGAAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCGACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAATTGCAAATTTTTATGCTGGTCAAGAGAAAGATTAACTTACTTTCTGGAATCAGAGCCTTTC
CTCTATGAAATATTTAGGTATCTCATTGGAAAAGACATCACGAACAAGCTCTACTCATTGAATGATCCCACC
TTAAATGATACAAAGACCAGAAAGCTGGAGCACCAGCTGAGCCTCTGTGCACAGATCTCCATGATGGAGATG
AGGAACAGCATAGCCAGCTCCAGCGACAGTGACGATGGCCTGCACCAGTTCCTCCGCAGCACCTCCAGCATG
TCCTCTCTTCATTCATCCCCGCACCAGCGCGCCTCCGCCAAGATGAAACCCATAGAAGAAGGGGTGGAAGAT
GATGTCTTTGAACCGGTGTCTCCACATTTGCCT
>POPD1_CAVPO_ENSCPOT00000006246
ATGAACGGGACCTCTTGTGAAAACTGGCGAGAGATACATCATCTAGTTTTTCATGTAGCAAATATTTGTTTT
GCAGTTGGTTTGGTTATTCCAACTACTCTTCACCTTCATATGATACTTCTTAGAGCGATGTTGACTCTAGGG
TGTACCCTCTATATTGTATGGGCCACTCTCTACCGATGTGCCTTGGATATAATGATTTGGAATTCTGTGTTC
CTGGGTGTCAACGTTTTGCATCTTTCGTATCTTTTGTACAAGAAGAGACCGGTGAAGATCGAGAGGGAGCTC
AGTGGCATGTACCGGCGGTTGTTTGAGCCACTCCGCGTGCCTCCAGATTTGTTCAGAAGATTAACGGGACAG
TTTTGCATGATCCAGACCTTGAAGAAGGGCCAGACGTATGCTGCAGAGGATAAAACCTCAGTCGATGACCGT
CTGAGTATTCTCCTGAAGGGAAGAATGAAGGTCTCCTATAGAGGACATTTTCTGCATAATATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACTGAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACTTACTTTCTGGAATCAGAGCCTTTC
CTGTATGAAATATTTAAGTATCTCATAGGAAAAGACATTACAAATAAGCTGTATTCATTGAACGATCCCACC
TTAAATGATAAAAAAGCCAAAAAGTTGGAGCACCAGCTCAGTCTCTGCGCACAGATCTCCATGCTCGAGATG
AGGAACAGCATCGCCAGCTCCAGCGACGGCGAGGACGGCTTGCACCAGTTCCTGCGGGGCTCCTCCAGCACG
TCCTCCCTCTATTCTTCCCCACACCAGCGAGCTTCTGCCAAGATGAAGCCTATCCAGGAAGGCGTGGAAGAC
GACGTCTTTGAACCTGCGTCTCCACAGTTTCCT
>POPD1_ICTTR_ENSSTOT00000003815
ATGAATGAGACCACTTGTGAAAACTGGAGAGAGATACATCATCTAGTTTTTCATGTGGCAAATATTTGTTTT
GCAGTTGGTTTGGTTATTCCAACTACTCTTCACCTTCATATGATATTTCTTAGAGGGATGTTAACTATAGGT
TGCACCCTTTATATCGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATAATGATCTGGAACTCTGTGTTC
TTGGGCATCAACATTTTGCATCTTTCATATCTTTTATACAAGAAAAGACCGGTCAAGATTGAAAGGGAACTC
ACTGGCATCTACCGTCGATTATTTGAACCACTCCATGTGCCTCCAGATTTGTTCAGAAGATTGACTGGACAG
TTTTGCATGATCCAAACCTTGAAAAAGGGCCAGACGTATGCCGCAGAGGATAAAACCTCAGTTGATGACCGT
CTGAGTATTCTCCTGAAGGGAAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACTTACTTTCTGGAATCAGAGCCTTTC
CTGTATGAGATATTTAGATATCTTATAGGAAAAGACATTACAAATAAGCTGTATTCATTGAATGATCCCACC
ATAAATGATAAAAAGGCCAAAAAGTTAGAGCACCAGCTCAGCCTTTGCGCACAGATCTCCATGCTGGAAATG
AGGAACAGCATAGCCAGCTCTAGCGATGGGGAAGACGGTTTACACCAGTTTCTGCGGGGCTCCTCCAGCTTG
TCTTCTCTTCACTCTTCCCCACAGCAGCGATCTTCTACCAAGATGAAGCCCATAGAGGAAGGGGTGGAGGAT
GATGTCTTTGAACCAGTGTCTCCACAGCTGCCT
>POPD1_RABIT_ENSOCUT00000016942_mod
ATGAATACAACCACTTGTGAAAACTGGAGAGAGATACATCATCTAGTTTTTCATGTAGCAAATGTTTGCTTT
GCAATTGGGTTGCTTATTCCAACCACTCTCCACCTGCATATGATACTTCTTAGGGGAATGATGACTATGGGT
TGTGCCCTTTATATCGTGTGGGCCACACTCTACCGCTGTGCCTTGGATATAATGATCTGGAACTCGGTATTT
TTGGGTGTGAACGTTTTACATCTTTCATATCTTTTGTACAAGAAGAGACCGGTAAAGATCGAAAAGGAGCTC
AGTGGCATCTACCGGCGATTGTTTGAACCACTGCGGGTGCCTCCAGACTTGTTCAGAAGGTTGACCGGACAG
TTTTGCATGATCCAGACCCTGAAAAAGGGCCAAACTTATGCTGCAGAGGATAAAACCTCAGTTGATGACCGT
CTGAGTATTCTCCTGAAGGGAAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCAGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTGTT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACCTACTTTCTAGAATCAGAACCCTTC
CTGTATGAGATATTTAGGTATCTTATAGGAAAAGACATTACAAATAAGCTCTACTCGTTGAATGATCCCACC
TTAAATGATAAAAAGGCCAAGAAGCTGGAGCACCAGCTCAGCCTGTGCACGCAGATCTCCATGCTGGAGATG
AGGAACAGCATTGCCAGCTCCAGCGACAGTGAAGACGGCCTACACCAATTTCTTCGGGGCTCCTCCAGCGTG
TCCTCGCTGCATTCCTCCCCACACCAGCGAGCCTCTGCCAAGATGAAGCCAATCGAAGAAGGTGTGGAAGAC
GATGTCTTTGAACCCGTGTCTCCGCAGCTGCCT
>POPD1_PIG_ENSSSCT00000004825
ATGAATGAGACCACCTGCGAAAACTGGCGAGAGATACATCATCTAGTGTTTCATGTAGCAAATATTTTTTTT
GCCATTGGGTTGGTTCTTCCAACTACTCTTCACCTTCATATGATACTTCTTAGGGGAATGTTAACTATAGGA
TGTACCCTTTATATCGTCTGGGCCACTCTCTACCGCTGTGCCTTGGATATCATGATCTGGAACTCTGTGTTC
CTGGGGATCAACGTTTTGCATCTTTCATATCTTTTGTACAAGAAGAGACCGGTGAAGATCGAAAAGGAACTC
AAAGGCATCTACCAGCGATTGTTTGAACCACTCCGTGTGCCTCCAGATCTGTTCAAAAGATTAACAGGACAG
TTTTGCATGATCCAAACGTTGAAAAAGGGCCAGGCCTATGCTGCAGAGGATAAAACCTCAGTTGACGACCGT
CTGAGTATTCTCCTGAAAGGAAAAATGAAGGTCTCCTATCGAGGACACTTTCTGCATAACATTTACCCCTGT
GCCTTCATAGATTCTCCTGAATTTAGATCAACCCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGGTTAACCTACTTTCTGGAATCAGAGCCTTTC
CTGTATGAAGTATTTAGATATCTTATAGGAAAAGACATTACAAATAAGCTCTACTCATTGAATGATCCCACC
TTAAATGATAAAACAATCAAAAAGTTGGACCACCAGCTCAGTCTTTGCACGCAGCTCTCCATGCTGGAAATG
AGGAACAGCATAGTCAGCACCAGTGACAGCGAGGACGGCTTACACCAGTTTCTTCGGGGCACCTCCAGCGTG
TCCTCTCTTTATCCATCCCCACACCAGCGAGCCTCTGCCAAGATGAAGCCAATAGAAGAAGGAGTGGAGGAT
GACGTCTTTGAACCAGAGACTCCACAATTGCCT
>POPD1_HORSE_ENSECAT00000022877_mod
ATGAATGGGACCACTTGTGAAAACTGGAGAGAGATACATCATCTAGTTTTTCATGTAGCAAATGTTTTTTTT
GCCATTGGTTTGATTATTCCAACTGCTCTTCACCTTCATATGATACTTCTTAGGGCGATGTTTGCTATCGGA
TGTACCCTTTATATCGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATCATGATCTGGAACTCTGTGTTC
CTGGGTGTCAACGTTTTGCATCTTTCATATCTTTTGTACAAGAAAAGACCGGTGAAGATTGAAAAGGAACTC
AGCGGTATCTACCGGCGGTTGTTTGAACCGCTCCGTGTGCCTCCAGATTTGTTCAGAAGATTAACCGGACAG
TTCTGCATGATCCAAACCTTGAAAAAGGGACAGACTTATGCTGCAGAGGATAAAACCTCAGTCGACGACCGT
CTGAGTATTCTCCTGAAGGGAAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACTTACTTTCTGGAATCAGAACCTTTC
CTGTATGAAATATTTAGATATCTTATAGGAAAAGACATTACAAATAAGCTGTACTCATTGAATGATCCCACC
TTAAATGATAAAAAGGCCAAAAAGCTGGAACACCAGCTCAGCCTTTGCACGCAGATCTCCATGCTGGAAATG
AGGAACAGCATAGCCAGCTCCAGTGACAGCGAAGACGGCTTACACCAGTTTCTTCGGGGCGCCTCCAGCGTG
TCCTCTCTTCATTCATCCCCACACCAGCGAGCCTCCGCCAAGATGAAACCAATAGAAGAAGGGGTGGAAGAT
GACGTCTTTGAACCCGTGTCTCCACAGTTGCCT
>POPD1_AIMLE_XM002917044
ATGAATGAGACCACATGTGAAAACTGGAGAGAGATACATCACCTAGTTTTTCATGTAGCAAATATTTTTTTC
ACCATTGGGTTGGTTATTCCAACTACTCTTCACCTTCATATGATACTCCTTAGGGGAATGTTAGCTATAGGA
TGCACCCTTTATATTGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATCATGATCTGGAACTCTGTGTTC
CTGGGTGTCAACATTTTGCATCTGTCATATCTTTTGTACAAGAAAAGACCGGTAAAGATTGAGAAGGAGCTC
AGTGGCATCTACCGCCGATTGTTTGAACCACTCCGTGTGCCTCCAGATCTGTTCAGAAGATTAACCGGCCAG
TTTTGTATGATCCAAACCTTAAAAAAGGGCCAGACGTACGCTGCGGAGGATAAAACCTCAGTCGACGACCGT
CTGAGTATTCTCCTGAAGGGGAAAATGAAGGTTTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATCATT
GCAGATGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACTTACTTTCTGGAATCAGAACCATTT
CTATATGAAATATTTCGGTATCTTATAGGAAAAGACATTACAAATAAGCTTTACTCATTGAATGATCCCACC
TTAAATGATAAAAAGGCCAAAAAGCTGGAACACCAACTCAGCCTGTGCACACAGATCTCCATGCTGGAAATG
AGGAACAGTATCGCCAGCTCCAGTGACAGCGATGATGGCTTACACCAGTTTCTTCGGGGCACCGCCAGCATG
TCCTCTCTCCACCCATCCCCACACCAGCGGGGCTCTGCCAAGATGAAACCAATCGAAGAAGGGGTGGAAGAT
GACGTCTTTGAGCCCGTGTCTCCACAGTTGCCT
>POPD1_MYOLU_ENSMLUT00000006883
ATGAATGAGACCACCTGTGAAAACTGGAGAGAAATACATCATCTAGTTTTTCATGTAGCAAATGTTTTTTTT
GCAATTGGGTTGGTTATTCCAACTACTCTTCACCTCCATATGATACTTCTTAGGGGGATGTTAGCTATAGGA
TGCTCCTTTTACATCATGTGGGCCACACTCTACCGATGTGCCTTGGATATCGTGATCTGGAACTCAGTGTTC
CTCGGTGTCAATATGTTGCATCTTTCATATCTTTTGTTCAAGAAAAGACCGGTCAAGATTGAAAAGGAACTC
AACGGCGTCTACCGGCGATTGTTTGAACCACTCCTAGTGCCTCCAGATTTGTTCAGAAGATTAACTGGACAG
TTTTGTATGATCCAAACCTTGACAAAGGGCCAGACTTATGCTGCAGAGGATAAAACCTCAGTCGACGACCGT
CTGAGTATTCTCCTGAAGGGAAGAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTGTT
GCAGACGATAACTGCAGATTTTTATGCTGGTCAAGAGAAAGATTAACTTACTTCCTGGAATCCGAACCTTTC
CTGTATGAAATATTTAGGTATCTTATAGGAAAAGACATTACAAATAAGCTCTACTCATTGAATGATCCCACC
TTAAATGATAAAAAGGCCAAAAAGTTGGAGCACCAGCTCAGCCTCTGCACGCAGATCTCCATGCTGGAAATG
AGGAACAGCATAGCCAGCTCCAGTGACAGCGAGGACGGCTTACACCAGTTCCTCCGGGGCACCCCCAGCGTG
TCCTCTCTCCATTCATCCCCACACCAGCGAGCCTCGGCCAAGATGAAACCAATAGAAGAAGGAGTGGAAGAC
GATGTCTTTGAACCCGTGTCACCAGAGTTGCCT
>POPD1_LOXAF_ENSLAFT00000009473
ATGAATGAAACCACTTGTCAAAACTGGAGAGAGATACATCATCTAGTTTTCCATGTAGCAAATATTTGTTTT
GCAATTGGGCTGATTATTCCAACCAGTCTTCACCTCCATATGATACTTCTTAGAGGGATGTTAGCTCTAGGA
TGTACCCTTTATATCGTCTGGGCCACGCTCTACCGATGTGCCTTGGATGTAGTGATCTGGAGCTCTGTGTTC
TTGGGTGTCAACATTTTGCATCTTTCATATCTTTTGTACAAGAAAAGACCGGTAAAGATTGAAAAGGAACTC
AGTGGCATCTACAGGCGATTGTTTGAACCACTCCGTGTGTCTCCAGATTTGTTCAGAAGATTAACTGGACAG
TTTTGCATGATCCAAACCTTGAAAAAGGGTCAGACCTACGCTGTAGAGGACAAAACCTCTGTTGATGACCGC
CTGAGTGTCCTTCTGAAAGGAAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAACATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTAGATCAACCCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATT
GCAGACGATAACTGCAAATTTTTATGCTGGTCCAGGGAAAGGTTAACTTACTTTCTAGAATCAGAACCTTTC
CTGTATGAAATATTTAGATATATTATAGGAAAAGACATTACAAACAAGCTGTACTCACTGAATGATCCTACA
TTAAATGATAAAAAAGTCAATAAGCTGGATCATAAGCTCAGCCTTTGCACACAGATCTCCATGCTGGAAATG
AGGAACAGTATAGCCAGTTCCAGTGACAGTGATGATGGATTACACCAGTTTCTCCGGGGGACCTCCAGTATC
TCCTCTCTTCATTCATCCCCACACCAGCGAGCCTCTGCCAAGATGAAACCGATAGAAGAAGGGGTGGAAGAT
GACGTCTTTGAACCGCCGTCTCCACGATGGCCT
>POPD1_SARHA_ENSSHAT00000015522
ATGAATGGAACCACTTGTGAAAACTGGAGAGAGATACATCACCTGGTTTTCCATGTAGCAAATATCTGTTTT
GCAGTGGCTTTGGTTATTCCAACTACCTTGACACTTCATATGATATTTCTTAGAGGGTTGTTAACTATAGGA
TGTGCTCTTTTTATTGTCTGGGCTACACTGTACAGGTGTGCTTTGGATATAATGATCTGGAATTCTGCATTC
CTGATTGTCAACTTGTTGCATTTTGTGTACCTGTTGTACAAAAAGAGACCGATAAAGATCGAAAAGGAACTT
ACTGGTATATACCGGCGAATGTTTGAACCATTACGTGTACCCCCAGAATTGTTCAAAAGATTAACTGGACAG
TTTTGCAATATTCAGACCATAAAAAAGGGCCAGACCTATGCTGCAGAGGATAAAACATCTGTGGATGATCGT
CTGAGTATTTTATTAAAGGGAAAAATGAAGGTCTCCTATCGAGGACATTTTCTGCATAATATTTACCCCTGT
GCCTTTATAGATTCACCTGAATTTCGATCAACTCAGATGAACCGTGGTGAAAAATTTCAGGTCACCATTGTT
GCAGATGATACTTGTAGATTCTTGTGCTGGTCAAGAGAGAGATTAACTTTTTTTCTGGAATCAGAACCATTC
CTTTATGAAATATTTAGATACCTTATTGGAAAGGATATCACAAATAAATTATACTCCTTGAATGATCCCACA
TTAAATGATAAGAATGCCAAAAGGTTGGAACGCAAGCCCAGTCTTTGCTCGCAGATTTCAGTGATGCAAATG
AGAAACAGTATGGCTAGTTCAAGTGATAGTGAAGATGGATTGCAGCACTTCCTCAGGGGGACCTCCACTGCA
TCTTCTATTCGTCCTTCCCCGTACATGAGAGGCTCTGAAAAAATGAAGCCCATTGAAGAAGCTGTTGAAGAT
GATGTCTTTGAGCCAGAATCTCCAAAAGTTCGT
>POPD1_TAEGU_ENSTGUT00000012726_mod
ATGAATGAGACTGCATGTGAAAACTGGAAAGAGATTCATCATCTTGTTTTCCACGTGGCAAACATTTGCTTT
GCAGTTGGATTGGTTATTCCAACTACTTTGAATCTTCATATGATTCTTCTGCGAGGCCTGCTCACCATAGGA
TGTGCATTATTCATCATTTGGGCTACACTCTACCGTTGTGCCTTGGACATAATGATCTGGAATTCTGTGTTT
TTGGTTGTCAACCTTTTGCATTTCATATACCTGGTGTATAAAAGAAGACCGATCAAGATAGAGAAGGAACTT
AGCAGCCTCTACAAGAGAATGTTTGAACCCCTCCATGTGCCTCCAGAGCTCTTCCAAAGACTAACTGGACAA
TTCTGCAACATTCAGACTTTGAAGACAGGTCAAGCCTATGCAGCAGAAGATAAAACATCAGTGGATGATAGG
CTAAGCATCCTGCTGAAGGGGAAAATGAAGGTGTCTTATCGAGGACATTTTCTGCATAATATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATTTCGATCAACACAGATGAACCGGGGTGAGAAATTCCAGGTCACCATTATT
GCAGATGATAACTGCAAGTTCCTGTGCTGGTCCAGGGAAAGGCTGACTTATTTTCTGGAGTCTGAGCCATTT
CTTTATGAGATCTTTAAGTACCTTATTGGCAAAGATATTACAAATAAACTTTATTCATTGAATGACCCAACC
TTAAATGACAAGGCTTCAAAGAAGATTGACCGGCAGTCCAGCCTTTGCTCTCAGCTGTCTGTGATGCAGATG
AGGAACAGCATGGCCAGCACCAGTGATAGCGAGGATGGCTTGCAGATGTTTCTTCGTGGGACTTCCTCTGCA
TCCTCTCTTCGCACATCTCCTTACCTGAGAACTTCAGCAAAGATGAAGCCCATAGAAGAAAGTGTTGAGGAT
GATGTCTTTGAAGCACCGTCTGCTCGGCTGCCT
>POPD1_MELGA_ENSMGAT00000018393_mod
ATGGATGAGACTGCTTGTGAAAACTGGAAGGAGATCCATCATCTTGTTTTCCATGTGGCAAATATTTGTTTT
GCAGCTGGCCTGGTTATTCCAACGACTCTGAACCTTCATATGATTTTTCTGCGAGGTTTGCTCTCCATAGGA
TGTGCATTGTTCATCATTTGGGCTACACTCTACCGTTGTGCCTTGGACATAATGATCTGGAATTCTGTGTTT
TTGGTGGTCAACCTTTTACACTTCATATACCTAGTATATAAAAGAAGACCGATCAAGATAGAGAAGGAGCTC
AGCAGCCTGTACAAGAGAATGTTTGAACCACTCCATGTGCCTCCAGAGCTATTCCAGAGATTAACTGGGCAA
TTCTGCAACATTCAGACTTTGAAGGCAGGTCAAGCTTATGCTGCAGAGGATAAAACATCAGTTGATGACAGG
CTAAGCATCCTACTGAAGGGGAAAATGAAGGTTTCTTATCGAGGGCATTTTCTGCATAATATTTACCCCTGT
GCCTTTATAGATTCACCTGAATTTCGATCAACTCAGATGAACCGGGGTGAAAAATTCCAGGTCACCATTATT
GCAGATGATAATTGCAAGTTCCTTTGCTGGTCCAGAGAAAGACTGACATACTTTCTGGAAACTGAGCCATTT
CTTTATGAAATCTTTAAGTATCTTATTGGCAAAGATATTACAAATAAACTCTATTCATTGAATGACCCAACC
TTAAATGACAAGGCCTCAAAAAAGATTGATCGGCAGCCAAGTCTTTGCTCACAGCTCTCTGTGATGCAGATG
AGGAACAGTATGGCCAGTACCAGTGACAGCGAGGATGGCTTGCAGATGTTTCTTCGCGGGACTTCCTCTTCA
TCTTCTCTTCGCACATCACCCTACCTGAGAACTTCAGCAAAGATGAAGCCAATAGAAGAAAGTGTTGAAGAT
GATGTCTTTGAAGCACCGTCAGCTCGGCTGCCT
>POPD1_ANOCA_ENSACAT00000003932_mod
ATGGATGAAACTGCCTGTGAACACTGGAGAGAAATCCACCATCTGGTTTTTCATATGGCCAATATCTGCTTT
GCGGTTGGATTGGTTATTCCAACCACTTATCATCTCCATATGATTGTCCTACGAGCCTTGCTAACAATAGGT
TGTGCACTTTTTATCATCTGGGCCACACTTTTCCGCTGCGCCCTGGACATAATGATCTGGAATATAGCATTC
CTTGTTGTTAACCTTCTGCATTTATTATACTTGCTATATAAGAGAAGACCGATAAAGATAGACAAAGAGCTC
AGCAGTCTCTATAAGAGAATGTTTGAACCGCTCCATGTGCCTCCAGAGCTGTTCCAAAGGCTGACAGGTCAA
TTCTGCAATATTCAGACCCTGAAAACAGGTCAAGCATATGCGTCAGAGGACAAAACATCAGTGGATGATCGA
TTAAGTATTCTGCTAAAAGGAAAAATGAAGGTCTCCTATCGAGGGCATTTCCTGCATAATATTTACCCCTGT
GCCTTTATAGATTCTCCTGAATATCGTTCAACTCAGATGAATCGGGGTGAGAAATTCCAGGTCTCCATTACT
GCTGATGATAACTGCAAGTTCTTATGCTGGTCTAGAGAAAGACTTGCATATTTTCTGGAATCCGAGTCATTT
CTTTTTGAAATATTTAAGCATCTCATTGGAAAAGATATTACAAACAAGCTATATTCATTAAATGACCCAACC
CTAAATGATAAGACATCTCAAAAAATAGATCGGCAGCCCAGCCTGTGTTCACAGCTCTCTGTGATGCAAATG
AGGAACAGCATGGCTAGTTCAAGTGATGGGGAAGAGGGCTTGCAGCATTTTCTCCGTGGGACTTCCTCTGTC
TGCTCTCTTCGTCCATCTCCTCATTTAAGAACATCACCTAAAATGAAACCAATTGAAGAAAGCGTGGAGGAT
GATGTCTTTGAGTTTCCATCTGCTTGCCTACCT
>POPD1_LATCH_XM014489578_mod
ATGAATGAAATAGTATGTGACAGTTGGAGAGAAATTCATCACTTGGTCTTCCATGTTGCAAATGCTTGCTTG
GCTGTTGGGCTTGTCATTCCAACAACCTTGAATTTTCATATGATAATTCTACGTATTATGCTAACTGTAGGA
TGTGCACTGTTTATTGTCTGGGCAACTCTCTACCGATGTGCATTAGATATAATGATCTGGAATGCTGTATTC
CTTGTTGTCAACCTGATGCATTTTATGTATCTAGTGTACAAAAGAAGACCAATCAAGATTGACAGGGAACTC
AAGACGGTCTACAGGAGAATGTTTGAACCCCTCCATGTGCCTCCAGATTTGTTCCAGAGACTGACAGGACAG
TTTTGCACCATTCAGACACTGAAAAAGGGCCAGGCATATGCTGCAGAGGATAAAACTTCTGTTGATGAACGA
CTAAGTATCCTGTTGAAGGGAAAAATGAAGGTTTCCTACCGTGGGCATTTTCTACATAATATTTACTCTAAT
GCCTTCATTGACTCGCCTGAATTCAAATCAACCCAGATCAACCGTGGTGAAAAATTCCAGGTCACCATTTTA
ACTGAAGACAACTGCAAGTTTCTCTGCTGGTCAAGGGAGAGGTTAACTTTTTTCCTAGAGTCTGAACCGTTC
CTTCACGAAGTGTTTAAATATCTAATAGGAAAAGACATCACAAACAAGCTGTATACCCTTAATGATCCCACA
TTAAGTGACAAGACAGCTAAAAAGTTGGATCGTCAGCCAAGCCTCTGTTCTCAACTTTCAATGATGCAGATG
AGAAACAGTATAGCCAGTACTAGTGAGGCTGATGATGCCTTACACCAATTTCTTCGGGGGAGTTCAACGGCT
TCATCCCTTCGTCGGTCCCCCTTCATGAGGACTTCAACGAAAATGAGGCCAATTGAAGAAGTTATTGAGGAT
GATGTCTTTGAGCCTGCATACCCC------CCC
>POPD1a_TETNG_ENSTNIT00000017431
CTGTGT------------------------------------------------------------------
---------------------------------------------------------------GTGACAGGA
TGCGGCCTCTTCATCGTCTGGGCGTCTCTGTACAGATGCAACCTGGACGTGATGATCTGGAACCTCGTCTTC
CTGTTGGTCAATTTCCTCCACCTGTTCTTCCTGCTGTACAAACGTCGACCGATCAAGATCGACAGAGAGCTG
CGCTCGCTGTACAAGCGCATGTTTGAGCCGCTGCGTGTGAGGGAGGCGCTGTTCCGGAGGCTGACGGGGCAG
TTCTGCACCATCCAGACGCTGAAGAGAGGCCAGGTCTACGCCGCCGAGGACAAGACGTCCGTGGACGAGCGC
CTCAGCATTCTGCTCAAAGGAAAGATGAAGGTGTCCTACCGCGGCCACTTTCTCCACAACATCTACACCAAC
TCATTCATCGATTCCCCCGAGTTCAGGTCCACCGAGATGCACAGAGGAGAAAAGTTCCAGGTGACCATCACG
GCGGAGGAGAACTGCAAATACCTGTGCTGGTCTCGAGAGAGGCTGACCTACTTCCTGGAGTCAGACACCTTC
CTCAACGAGGTCTTCAGGTACCTCATCGGCAAGGACATCACCAACAAGCTGTACTCCCTGAACGACCCCACC
CTCAGCGACAAGGCGGTGAAGAAGATGGAGCGTCAGCCCAGCCTGTGTTCCCAGCTGTCCATGATGCAGATG
AGGAACAGCATGGCCAGCACCAGCGACACCGACGACGTCCTCAACCAGATCCTGCGT---GGATCCGCTCCG
TCCTCCCTACAGAAATCTCCAGGCACCAAAGCCTCCTCAAAGATGAAGCCCATCCAGGAGGACATGGAGGAC
GATGTTTTCATGGAGTCTTCTGCCCAGATGCCC
>POPD1b_TETNG_ENSTNIT00000004944
CTGGCT------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------CTCTGTGGCAGGATGAAGGTGTCCTACCGCGGCCACTTTCTCCACAACATCTACACCAAC
TCATTCATCGATTCCCCCGAGTTCAGGTCCACCGAGATGCACAGAGGAGAAAAGTTCCAGGTGACCATCACG
GCGGAGGAGAACTGCAAATACCTGTGCTGGTCTCGAGAGAGGCTGACCTACTTCCTGGAGTCAGACACCTTC
CTCAACGAGGTCTTCAGGTACCTCATCGGCAAGGACATCACCAACAAGCTGTACTCCCTGAACGACCCCACC
CTCAGCGACAAGGCGGTGAAGAAGATGGAGCGT---CCCAGCCTGTGTTCCCAGCTGTCCATGATGCAGATG
AGGAACAGCATGGCCAGCACCAGCGACACCGACGACGTCCTCAACCAGATCCTGCGT---GGATCCGCTCCG
TCCTCCCTACAGAAATCTCCAGGCACCAAAGCCTCCTCAAAGATGAAGCCCATCCAGGAGGACATGGAGGAC
GATGTTTTCATGGAGTCTTCTGCCCAGATGCCC
>POPD1_GASAC_ENSGACT00000018546
ATAAGTAGCACCTCTTGCGAGGAGGGGGAGCAGACCCACCACCTCCTTTTCCATCTGGCGAGCCTGTCCTTG
CTATTGGGTCTCGTCATCCCCACCACCCTTGCCCTGCACATGATCCTGTTGCGCCTCCTCTTGATGACAGGA
TGTACTCTCTTCATTGTGTGGGCGGCACTGTACAGGTGCAACCTGGATGTGATGGTTTGGAATGTGGTGTTT
CTGGTGGTCAACTTCATGCACCTGTTCTTCCTCCTGTACAAGCGAAGACCGATTAAAATCGACAGGGAGTTG
CAGTCTGTCTACAAGCGGATGTTTGAGCCGCTCCATGTGCAGGAGGCTCTTTTTCAGAGGCTCACAGGGCAG
TTCTGCACCATACAGACTCTAAAGAAGGGCCAGGTTTATGCTGCCGAGGAGAAAACATCTGTGGACGAACGT
CTCAGCATTCTCATCAAAGGAAAGATGAAGGTATTGTATCGAGGTCATTTTCTTCACAACATCTATACCAAT
TCCTTCATTGACTCGCCAGAGTTCAGGTCCACTGAAATGCACAGAGGAGAGAAGTTTCAGGTGACCATCATG
GCCGAGGAGAACTGTAAATTCCTTTGTTGGTCTCGAGAGAGGCTCACCTACTTCCTGGAGTCCGATACTTTC
CTAAATGAGGTGTTCAGATACCTCATCGGCAAAGACATTACCAACAAACTGTACTCTCTAAATGATCCCACA
CTCAGTGACAAGGCTGTGAAGAAAATGGACCGTCAGCCAAGCCTATGCTCTCAGTTGTCTATGACGCAAATG
AGGAACAGCATGGCGAGCAACAGCGACACTGATGATGTCCTTAACCAGATCCTACGAGGAGGTTCTGCTGGA
TCATCACTGCAAAAATCTCCAGGAACCAAGGCCTCCTCAAAGATGAAACCCATAGAAGAAGGCATGGAAGAT
GATGTTTTT---GAAGACACTCCTCATATGCCA
>POPD1_ORENI_ENSONIT00000020807
ATGTCCGCCACCTCGTGCCAGGAGTGGGAGCGGACCCACCACCTGCTATTCCATGTGGGAAACTTGTCCTTG
CTGTTGGGCCTGGCCATCCCGACTACCTTGGCTCTGCACATGATCATGCTGCGTCTCCTCCTGACAGCAGGA
TGTGGTTTATTCATCGCGTGGGCCACGCTGTTCAGGTGCAACATGGATCTAATGGTTTGGAACGTGGTCTTC
CTGGTGATCAACTTCGTACACCTTTTCTACCTTTTGTATAAACGCAGGCCGATTAAGATTGACAGGGAGTTG
CGGTCAGTCTACAAGAGGATGTTTGAGCCTCTGCATGTGCAGCAGGCTTTGTTCCAGCGACTCACGGGACAG
TTCTGCACCATTCAGACGCTGAAGAAAGGCCAGGCCTACGCTGCTGAGGACAAGACGTCTGTAGACGAACGC
CTCAGCATTCTGCTCAGAGGAAAGATGAAAGTTTCATACCGAGGCCATTTTCTCCACAACATCTACACCAAC
TCATTCATTGACTCTCCAGAGTTCAGGTCCACTGAGATGCACCGAGGAGAGAAGTTTCAGGTGACCATCATG
GCAGAAGAGAACTGTAAGTTCCTGTGTTGGTCTCGAGAGAGACTTACCTATTTCCTGGAGTCAGACACTTTC
CTTAATGAGGTTTTCAGGTTCCTCATCGGCAAAGATATCACCAACAAACTGTACTCTCTGAATGATCCCACA
CTCAGTGACAAGGCTGTGAAGAAAATGGACCGACAGCCTAGCCTGTGCTCCCAGTTGTCTATGACGCAGATG
AGAAACAGCATGGCGAGCACCAGCGACACCGATGATGTTCTCAACCAGATCCTACGAGGTGGATCTGCTGGA
TCATCACTCCAGATTTCACCCGGCACCAAAGCCTCCTCAAAAATGAAGCCTATAGAAGAAGGCATGGAGGAT
GATGTGTTTGAA---GAATCTGCTCACATGCCC
>POPD1_ORYLA_ENSORLT00000024449
ATG---GCTACCTCCTGTCAACAGTGGGAGCAGCCCCACCACCTCTTCTTCCATCTGGGGAACTTGTCCCTG
TTGCTGGGTTTGGTCCTTCCCACCACACTGGGTCTGCACATGATCCTGCTGCGCCTCTTTCTAATGACAGGA
TGCAGCCTCTTCATTACCTGGGCAACACTGTACAGATGCAACCTTGATGTGTTGGTGTGGAACGTGATCTTT
CTGCTGGTCAACTTCATGCACTTCTTTTTTCTCTTGGTTTCTCTGCGGCAGATTAAAATTGACCGGGAGCTC
CAGCTGGTCTACAAGCGGCTGTTTAAGCCCCTCCACGTTAAAGAAGCACTTTTCCAGAGGCTGACAGGACAA
TTCTGCACCATCCAGACGCTGAAAAAGGGCCAGGCCTACGCAGTTGAGGACAAGACGTCCGTTGACGAACGG
CTCAGCATTCTGCTCAAAGGAAAGATGAAAGTGTCATACCGAGGACATTTCCTGCACAACATCTACTCCAAC
TCTTTCATTGACTCTCCAGAATTCAGGTCCACAGAGATGCACAGAGGAGAGAAGTTCCAGGTGACCATCATG
GCAGAAGAAAACTGTAAGTTCCTGTGCTGGTCCAGGGAGAGGCTGACATACTTCTTGGAATCTGACACCTTC
CTCAATGAGGTCTTCCGCTATCTGGTTGGCAAAGACATCACCAATAAACTGTACTCTCTGAATGATCCAAAG
CTCAGCGACAAGGCGGTTAAGAAGATGGACCGTCAGCCCAGCCTGTGTTCT---------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------
>POPD1_CIOSA_ENSCSAVT00000000435
ATGGAGGGCAGTTCGTGTCATGAGTGGATTTCACCTCAGAACCTCACTTTCCATGTCAGCATGGTGCTTTTC
TTGGTCTCGTTTTCCATCCCATGCACATTCAAGCATTATGTGATCACAAACCGAATCTTCCTCATGTTCGGT
GTGATGATGCTGATGTTGTGGGGCGTGTTGTACTGGTGTACATGGGACACGGTGATGTGGGGAGTTCTTCTT
CTTGTGCAGATCATCGCGCAACTCGTCTACGCCATCTACAAGAAGCGTCACATCAAGTTTCCATCGGCGCTT
GAGGAACTTTATATTGACGTGTTCCAGACATTCAACATCACCAGGCAAGAGTTCAAAGCATTGGTGCACCAG
AACTGCAAATGGGTTCATATCTTCCCCGGGGATAAATATGCAGTTGAGGGTAACACGACGGTGGAAGCAAGG
GTTTCTATGCTGGTGTCTGGAACATTACGAGTCACATACAAAGGAACTTTCTTGCATGACATCAAGGACAAG
CAGCTTATTGATTCCCCAGAATGGCAGAGCACTAAACTGAAGAGAGGGGAGAGTTTTCAGGTTACCATTGAA
GCTGTAGACAGATGCTTCTACCTTTGCTGGAACCGTGAAAAACTTCAATATTACTTACAAGTCAAGCCGAAA
CTAGAGCAAGCATTCAAGTACATCTGTGGCAAGGACGTGATGGATAAGGTGTACCAAACCACTCTA------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------AAT